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Dr. Harsh J Shah

Fistula-in-Ano (Bhagandar) Treatment in Ahmedabad: Fistulotomy or Seton, Matched to Your Track

Dr Harsh Shah · GI & Proctology Surgeon · Ahmedabad & Gandhinagar

Last updated: 18-Oct-2026

Fistula treatment in Ahmedabad · Gota OPD, Gota, Ahmedabad · Apollo Hospital, Bhat, Gandhinagar

In short: a fistula-in-ano, or bhagandar, is a small tunnel from inside the back passage to the skin near it. It almost never heals with tablets alone. Dr Harsh Shah first maps the track with an examination and, when needed, an MRI fistulogram.

He then offers one of two operations. A low, simple fistula is laid open (fistulotomy). A high or complex one gets a loose seton, a soft thread that drains the infection and protects the control muscle, with a planned second stage later.

Every plan balances two things: the chance of the fistula coming back, and the chance of weaker bowel control.

What a fistula is, and why it keeps coming back

A fistula usually starts as a pus boil (abscess) from a tiny gland inside the anal canal. When the boil bursts or is drained, a lined tunnel can stay behind and keep leaking.

Dr Harsh Shah, GI and proctology surgeon, Ahmedabad
Dr Harsh Shah, MS, MCh (Surgical Gastroenterology), DrNB (Surgical Gastroenterology).

Dr Harsh Shah has 18 years of experience in gastro and bowel surgery, including surgery of the anus and back passage. For fistula, he examines you himself, reads the MRI with you, does the examination under anaesthesia, and follows the wound until it has healed.

Dr Harsh Shah
MS, MCh (Surgical Gastroenterology), DrNB (Surgical Gastroenterology)
Registered with Gujarat Medical Council, Reg. No. G-38738
GI & Proctology Surgeon · Apollo Hospital, Bhat, Gandhinagar · Gota OPD, Ahmedabad

Google rating 4.89 from 216 reviews at the Gota clinic, and 4.94 from 18 reviews at Apollo, Bhat.

The inner opening sits inside the anal canal. The outer opening is the pimple-like spot on the skin that leaks pus or staining. Between them, the track runs through or around the ring muscles that hold stool in, the sphincter muscles. The outer opening often closes for a few weeks, then pus collects and it bursts again. Roughly one in six people with a first anal abscess go on to form a fistula.

Why a fistula does not heal with antibiotics alone

Antibiotics calm the redness and pain for a while. They cannot remove the lined tunnel or close the inner opening, so the infection returns once the course ends.

The lining stops the tunnel from closing, and the inner opening keeps letting bowel germs in. That is why repeated courses of tablets, creams or powders end with the same boil. Antibiotics still help with spreading redness, fever, diabetes or low immunity. But the cure is to deal with the track itself. A hot, painful lump is an abscess. It needs drainage under anaesthesia, not another course of tablets. Our perianal abscess drainage page explains that step.

Simple or complex: the type of track decides the operation

Surgeons group fistulas by how the track runs through the sphincter muscles, called the Parks types. A track that crosses little muscle is simple. A track that crosses a lot of muscle, branches or recurs is complex.

Fistula types in plain words, and Dr Shah’s usual plan
Type (Parks)Where the track runsSimple or complexUsual plan
SuperficialJust under the skin or lining. No sphincter muscle crossed.SimpleFistulotomy
IntersphinctericBetween the inner and outer ring muscles, low down.Usually simpleFistulotomy, if control is good
Low transsphinctericThrough the lower part of the outer muscle only.Simple in a man with good control and no earlier surgeryFistulotomy, after MRI and examination
High transsphinctericThrough the upper part of the outer muscle.ComplexLoose seton, staged plan
SuprasphinctericGoes up and over the whole outer muscle.ComplexLoose seton, staged plan
ExtrasphinctericOutside the whole muscle ring, from higher up.ComplexLoose seton, and a search for a cause higher in the pelvis

Some features make any fistula complex: a front-facing track in a woman, a fistula that has come back, more than one opening, a horseshoe track around both sides, weak control before surgery, and Crohn’s disease. Complex does not mean hopeless. It means cutting muscle is not the first answer.

Why the MRI fistulogram matters before surgery

Examination alone gets the track right only about six times in ten. MRI gets it right about nine times in ten in published studies, and it shows hidden branches and pus pockets that cause recurrence.

An MRI fistulogram is a pelvic scan taken in special planes along the anal canal. No dye is pushed into the opening. Dr Shah asks for it when a fistula has come back, has more than one opening, sits at the front in a woman, feels deep, or may be linked to Crohn’s disease.

  1. The type of track and how much of the outer muscle lies above it.
  2. The inner opening, its clock position and height.
  3. Side branches and horseshoe tracks, the commonest reason a fistula returns.
  4. Hidden pus pockets that must be drained first.
  5. Muscle damage from childbirth or earlier operations.
  6. Signs of Crohn’s disease in the bowel wall.

The two trade-offs: coming back, and bowel control

Cutting more muscle lowers the chance of the fistula returning but raises the risk of weaker control of gas or stool. Cutting less protects control but may need more than one stage. Your track decides where the balance sits.

How the two operations Dr Shah offers balance the trade-offs
Fistulotomy (lay-open)Loose seton, staged
Who it suitsLow, simple tracks that cross little muscle, with good controlHigh or complex tracks, women with front-facing tracks, Crohn’s, weak control
Muscle cutOnly the small part below the trackNone at the first stage
Chance of coming backLow; fistulotomy is the most reliable single cure for a simple trackHigher if the seton is simply removed; a second stage is planned for that reason
Bowel controlMinor leakage of gas or staining can occur; major loss is uncommon in a simple fistulaProtected while the seton is in
Number of operationsUsually oneTwo or more, weeks apart
HealingOpen wound heals in about 4 to 8 weeksSeton is comfortable within days; final healing depends on the second stage

Dr Harsh Shah explains both sides with your MRI in front of you, and you take part in the choice.

Examination under anaesthesia: where the final decision is made

Examination under anaesthesia (EUA) is a short check in the operating room while you are asleep or numb from the waist down. The track is confirmed, and the planned operation is done in the same sitting.

  1. Feeling the muscle. With one finger inside and one outside, the surgeon feels how much muscle lies above the track.
  2. Finding the inner opening gently, without forcing a probe. A forced probe can make a false tunnel.
  3. Mapping branches seen on MRI, so none is left behind.
  4. Deciding. If the track is low, it is laid open. If it is higher than expected, a loose seton is placed and the definitive step is staged.

You consent beforehand to that change of plan. Tissue and pus are sent for testing, including for tuberculosis.

Fistulotomy for a low, simple fistula

Fistulotomy opens the whole tunnel along its length so it heals from the bottom up as a shallow groove. For a simple track it is the most reliable single cure.

A fine probe is passed along the track. The skin and the small amount of muscle below it are divided, and the lining is scraped clean. The wound edges are stitched to the floor of the track (marsupialisation), which shortens healing. The wound is left open on purpose, because a closed wound over an infected track would bring the fistula back. It is usually a day-care or overnight operation under spinal anaesthesia.

Loose seton for a high or complex fistula: the staged plan

A loose seton is a soft silicone thread passed through the track and tied loosely outside. It keeps the track draining, settles the infection and cuts no muscle. It is the safest first step in a complex fistula.

  1. Stage one. At EUA, any pus pocket is drained and the loose seton placed. Desk work resumes within days.
  2. The waiting period. Usually 6 to 12 weeks, while the infection settles. A repeat MRI if the anatomy was unclear.
  3. Stage two. The plan depends on what the track has become. If it now crosses less muscle, it is laid open safely. If a long-term seton is wiser, as in Crohn’s disease, frailty or weak control, it stays. If a muscle-sparing repair is the right next step, Dr Shah tells you so and refers you to a centre that does it.

A loose seton is never tightened, unlike a cutting seton. Removing it without a second-stage plan often lets the fistula return, so the plan is written down before you go home.

Other fistula operations, and what Dr Shah offers

Other centres offer muscle-sparing repairs and device-based treatments. Dr Shah does not offer them. He keeps to EUA, fistulotomy and loose seton, and refers you if another method suits your track better.

Options that exist elsewhere, stated honestly
OptionWhat it isWith Dr Shah
LIFTThe track is tied and divided in the space between the two muscles, sparing the muscle.Not offered by Dr Shah; referral if it suits your track
Advancement flapA flap of bowel lining or skin is moved to cover the inner opening.Not offered by Dr Shah; referral if it suits your track
VAAFTA thin camera passed along the track to clean and seal it.Not offered by Dr Shah
Laser (FiLaC)A laser fibre passed along the track to seal it with heat.Not offered by Dr Shah
Glue or plugThe track is filled with surgical glue or a plug of material.Not offered by Dr Shah
Kshara sutraA traditional medicated thread that works as a slow cutting seton, changed weekly.Not offered by Dr Shah

If you arrive with a thread or seton already in place, Dr Shah reviews the MRI before anything is changed.

Crohn's disease, tuberculosis and other special cases

Some fistulas have a cause beyond a blocked gland. Crohn’s disease needs joint care with a gastroenterologist, and tuberculosis needs anti-TB medicines. Surgery alone does not cure either.

When the plan changes
SituationWhat is different
Crohn’s diseasePus is drained and a loose seton placed. Medical treatment by a gastroenterologist does the main work. Fistulotomy is avoided if the back passage is inflamed.
TuberculosisSeveral openings, thin watery discharge or repeated return after surgery raise the question. Tissue tests confirm it, and anti-TB medicines heal it.
Front-facing track in a womanThe muscle there is short. Muscle cutting is kept to the most superficial fibres, and a seton is favoured.
Diabetes or low immunitySugar control first, and a lower threshold for a seton.
Bleeding from the back passageA fistula rarely causes real bleeding. Bleeding is checked for other causes, with a colonoscopy in the right patients.
A track present for many yearsA long-standing track whose discharge or pain changes is sampled and sent for testing.

Recovery after fistula surgery, day by day

The first few days are sore; pain is controlled with tablets, sitz baths and stool softeners. Most people go home the same day or the next morning, and return to desk work within a week.

What recovery is really like
WhenFistulotomyLoose seton
Days 1 to 3Sore, especially with the first bowel movement. Regular tablets, softeners and sitz baths.Mild soreness. The thread feels odd at first.
Days 4 to 7Soreness easing. Light discharge on the pad is normal.Back to desk work.
Weeks 1 to 2First wound check. Back to desk work if not already.Check that the seton is loose and draining.
Weeks 4 to 8The wound closes from the bottom up. Manual work when sitting and walking are easy.Planning for stage two.

Come back at once with any of these.

  1. Fever with rising pain or a new swelling near the anus.
  2. Bleeding that soaks a pad.
  3. Unable to pass urine.
  4. New loss of control of stool.

Wound care at home: dressing and sitz baths

Keep the wound clean with sitz baths, keep stools soft, and use a light pad. The wound is not packed at home, because packing hurts and does not speed healing of a laid-open track.

  1. Sitz bath. Sit in a tub of plain lukewarm water for 10 minutes, two or three times a day and after every bowel movement. A hand shower works too.
  2. Pat dry with a soft towel. Do not rub.
  3. A light gauze pad over the wound or seton ends, changed when damp.
  4. Stool softener and fibre every day, with plenty of water. Avoid straining.
  5. Pain tablets on time for the first week, not only when the pain is bad.

The risks, named in words

Fistula surgery is common and usually safe, but it has real risks. The main ones are the fistula coming back and some weakening of bowel control. Both are discussed in person before consent.

Fistulotomy: minor leakage of gas or staining, lasting in some people. Major loss of stool control is uncommon after a simple fistula. The fistula can come back. Bleeding in the first days, difficulty passing urine after spinal anaesthesia, wound infection, slow healing in diabetes, and skin bridging over the wound too early.

Loose seton: irritation and discharge around the thread, a new pus pocket, the seton slipping out, and a second anaesthetic for stage two.

General risks: anaesthetic problems, clots in the legs, and chest or heart problems in older people. Dr Harsh Shah goes through each of these in person before consent, with the figures that apply to your track.

Your path, from first visit to full healing

  1. Book your consultation. Bring any MRI, earlier operation notes, sugar reports and a list of medicines. A hot, swelling lump with fever goes to the emergency department at Apollo Hospital, Bhat.
  2. Tests and treatment plan. Examination in clinic, an MRI fistulogram when needed, and a plan that names the trade-offs for your track.
  3. The surgery. EUA with fistulotomy or a loose seton, usually under spinal anaesthesia.
  4. Short hospital stay. Home the same day or the next morning, with written wound-care instructions.
  5. Follow-up and full healing. Wound checks at 1 to 2 weeks and 4 to 6 weeks, test results explained, and the second stage booked if you have a seton.

Cost, insurance and admission

The estimate depends on whether an MRI is needed, which operation is done, and whether one or two stages are planned. A staged seton plan means two admissions.

Apollo Hospital, Bhat, works with the major insurers and cashless schemes, and the office handles pre-authorisation. Bring: MRI and blood reports, earlier operation notes, a list of medicines, the insurance card and identification. You can also call +91-63555-64601 to ask what to bring.

Frequently asked questions

Can a fistula heal with medicines alone?

Rarely. Antibiotics settle the swelling for a while, but the lined tunnel and the inner opening stay. Tuberculosis is the main exception, where anti-TB medicines are the cure.

Do I really need an MRI fistulogram?

For a fistula that has come back, has more than one opening, sits at the front in a woman, or feels deep, yes. It finds hidden branches and pus pockets that cause the fistula to return.

Which is better, fistulotomy or seton?

Neither is better for everyone. Fistulotomy suits a low track that crosses little muscle. A loose seton suits a high or complex track, where cutting the muscle would risk bowel control.

Will I lose control of my bowels after fistula surgery?

Major loss of control is uncommon after a simple fistulotomy. Minor leakage of gas or staining can occur. A seton is chosen when the track crosses enough muscle to make that risk too high.

How long does the wound take to heal?

An open fistulotomy wound usually heals in about 4 to 8 weeks. Stitching the edges to the track floor shortens this. Most people return to desk work within a week.

How long does a seton stay in?

Usually 6 to 12 weeks before the second stage. In Crohn's disease or in frail patients it may stay longer. It is loose, so it does not cut the muscle.

Does Dr Shah offer the newer sealing treatments?

No. Dr Shah does not offer laser, VAAFT, LIFT, flaps, glue or plug. He offers EUA, fistulotomy and loose seton, and refers you if another method suits your track better.

Where Dr Harsh Shah sees and operates

Shah’s Gastro, Cancer & Robotic Surgery Centre — Gota, Ahmedabad
SF-203, 2nd Floor, Olive Greens, Gota, Ahmedabad.
Consultations, review of MRI fistulograms, planning of surgery, and wound follow-up.
Google: Dr Harsh Shah · 4.89 from 216 reviews
Directions to the Gota clinic · +91-63555-64601

Apollo Hospital, Bhat, Gandhinagar
Apollo Hospital International Limited, Plot No. 1 A, GIDC Bhat Industrial Estate, Bhat, Gandhinagar.
Google: Dr Harsh Shah – Robotic GI Surgeon · 4.94 from 18 reviews
Directions to Apollo, Bhat · WhatsApp +91-63555-64601

Patients come to Ahmedabad from across Gujarat, including Gandhinagar, Mehsana, Nadiad, Anand, Rajkot and Kutch, and from southern Rajasthan.

A boil near the anus that keeps bursting, or a wet, itchy opening that stains your underwear? Send your MRI fistulogram and earlier operation notes ahead, so they are read before you arrive. Fever with a hot, swelling lump near the anus needs the nearest emergency department today. Call +91-63555-64601 · Send the MRI and reports on WhatsApp

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Dr. Harsh J Shah
Dr Harsh Shah - Surgical Gastroenterologist and GI Robotic Surgeon, Ahmedabad
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