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Dr. Harsh J Shah

Ulcer Not Healing or Keeps Coming Back? What to Check

Last updated: 27-Oct-2026

Dr Harsh Shah, GI surgeon, Ahmedabad

Dr Harsh Shah
MS, MCh (Surgical Gastroenterology), DrNB (Surgical Gastroenterology)
Registered with Gujarat Medical Council, Reg. No. G-38738
Gastro & Cancer Surgeon
Apollo Hospital, Bhat, Gandhinagar · Gota OPD, Ahmedabad · 18 years of experience
★★★★★ Google: 4.89 from 216 reviews (Gota clinic) · 4.94 from 18 reviews (Apollo, Bhat)

In short

A stubborn ulcer is rarely a mystery. Most often the acid tablet is not working as planned. Or the germ is still there. Or a pain tablet is still being taken.

A stomach ulcer that will not close needs a fresh biopsy. This is how a growth hiding behind an ulcer is ruled out.

Too much acid from a rare gland tumour is checked last, with a blood test taken off the acid tablet. Surgery for a plain ulcer is now a last resort.

The full care plan for ulcers is on the peptic ulcer treatment in Ahmedabad page. This post is for the person whose ulcer did not follow the usual script. It lists what to check, in the order a surgeon checks it.

Slow to heal, or back again: which is it?

These are two different problems with different causes. Naming the right one saves months of guessing.

The words doctors use for a stubborn ulcer, and what each points to
TermWhat it meansWhat it usually points to
Ulcer that will not healStill open on a repeat scope after about two months of proper treatmentWeak acid control, germ still present, hidden pain tablets, or a growth
Ulcer that comes backIt healed on a scope, then a new one formedReinfection with the germ, a returning pain tablet, or a rare acid disorder
Ulcer after an operationUlcer next to a join between stomach and bowelAcid reaching bowel that is not built for it, smoking, or a missed acid disorder
Ulcer with no known causeNo germ, no pain tablet, nothing else foundA long-term condition that needs steady acid control

Symptoms alone cannot tell you which one you have. Burning can continue after the ulcer has healed. A healed ulcer can also bleed without burning at all.

First, is the ulcer really still there?

A repeat scope is the only way to know. Many people are labelled as having a stubborn ulcer by their symptoms, when the scope shows a healed lining.

  • Ask for a repeat scope after the course of treatment, not before it ends.
  • The doctor takes fresh biopsies from the edge and the base of any ulcer still open.
  • If the ulcer is healed, your burning may have another cause, such as acid reflux.

How an ulcer is told apart from other causes of stomach pain is in stomach pain: is it an ulcer.

The four usual reasons, checked in order

Four common and fixable causes explain most stubborn ulcers. They come before any rare disease, because common things are common.

  • The acid tablet is not doing its job. It must be taken before a meal, on time, every day. Missed doses and self-tapering are common. A twice-daily dose, or a newer and stronger acid blocker, may be needed.
  • The germ is still there. The first course of medicines can fail, and the germ can return. A test taken after the course is finished, and off the acid tablet, is the only proof it is gone.
  • A pain tablet is still being swallowed. This includes tablets for knees and back, and cold and period tablets. It also includes low-dose heart aspirin, and Ayurvedic or herbal products that hide a painkiller.
  • A growth sits behind the ulcer. A stomach ulcer that will not close is biopsied again, and scoped again until it heals.

Most “stubborn” ulcers close once one of these is fixed. The pain tablet trap is explained in painkillers and stomach ulcers.

Why the germ test can tell a false story

An acid tablet makes the germ harder to find. A breath or stool test done while you are on it can say “negative” when the germ is still there.

  • Tests for the germ need the acid tablet stopped for about two weeks first. Your doctor will say how to cover that gap.
  • Antibiotics taken for any reason in the last month can also give a false negative.
  • If the germ is found again, the next course is chosen with care, because the first choice has already failed.
  • After the second course, the test is repeated, again off the acid tablet.

The medicines, and how the germ is proved gone, are in found H. pylori: the 14-day medicines, step by step. Why the germ is so common here is in H. pylori is common in India.

When the body makes too much acid

Some ulcers are driven by a rare tumour of the gland cells that makes a hormone called gastrin. It floods the stomach with acid. It is uncommon, but it must not be missed.

Clues that point towards an acid-making tumour
ClueWhy it matters
Several ulcers at once, or ulcers beyond the first part of the small bowelOrdinary ulcers sit in one or two usual places
Watery diarrhoea that improves on the acid tabletExcess acid damages the bowel
Ulcers that return even after the germ and pain tablets are dealt withThe usual causes have been removed
Thick folds in the stomach on the scopeExcess acid stimulates the lining
High calcium, kidney stones, or a family history of gland tumoursThe tumour can be part of an inherited pattern

The first test is a blood level of gastrin. It is only meaningful when taken after the acid tablet has been stopped under your doctor’s guidance. An acid tablet pushes gastrin up and gives a false alarm. Never stop it on your own.

  • If gastrin is high and the stomach is truly full of acid, more tests follow. These are a stimulation test, calcium and hormone levels, and scans to find the tumour.
  • Acid control comes first. A strong acid tablet usually heals the ulcers while the tumour is looked for.
  • If the tumour is single and has not spread, surgery aims to remove it. The operation targets the tumour, not the acid.
  • These scans and operations are done in centres with endoscopic ultrasound and special PET scans, so referral is usual.

Ulcers with no clear cause

A small group of people have no germ and take no pain tablet, yet they get ulcers. This is a real condition. It is treated as a long-term one.

  • Before accepting this label, the germ is tested again by a method that is not blunted by the acid tablet.
  • The drug history is repeated, because a hidden pain tablet is the usual surprise.
  • Rarer causes such as bowel inflammation, infections in people on immune-lowering medicines, and poor blood supply are considered.
  • These ulcers tend to heal slowly and return. They usually need an acid tablet to continue, with scope follow-up.

Very large ulcers are a special case. A large stomach ulcer has a higher chance of hiding a growth. A large duodenal ulcer is more likely to bleed or burst. Both need close follow-up.

An ulcer after a stomach operation

An ulcer next to the join between the stomach and the bowel is called a marginal ulcer. It needs a blood test for gastrin, not just a bigger acid tablet.

  • Part of the old stomach may have been left behind and still makes acid.
  • The nerve that signals acid may not have been fully divided.
  • Smoking and pain tablets make these ulcers more likely and slower to heal.
  • A missed acid-making tumour can be the cause, so it is ruled out first.

An ulcer scar can also narrow the stomach exit and cause repeated vomiting. That problem is covered in vomiting undigested food: when the stomach exit is blocked.

When is an operation needed?

Surgery for an ulcer that does not heal is now rare. It is considered only after every cause above has been checked and fixed, and the ulcer is still there.

  • The gentlest option cuts the nerve branches that tell the upper stomach to make acid, and keeps the stomach exit working.
  • A larger operation cuts the main nerve and removes the lower stomach. It is less likely to relapse but changes digestion more.
  • When scarring narrows the exit, the nerve is cut and the exit is widened or bypassed.
  • A single large ulcer may be cut out and sent for biopsy.

The choice balances the chance of relapse against the side effects of a bigger operation. An acid-making tumour is always ruled out first, because the operation for it is quite different. What happens after a bleed or a hole is in what happens after an ulcer bleed or hole.

What to bring to the visit

Good records shorten the search. The next doctor should not have to start again from the beginning.

  • Every scope report and biopsy report, with dates, and the photographs if you have them.
  • The names, doses and dates of every acid tablet and antibiotic course you have taken.
  • Any germ test result, and whether you were on an acid tablet when it was done.
  • Every pain tablet, cold tablet, powder and herbal product you take, even rarely.
  • Any blood test for gastrin, calcium or blood count.

Questions to ask your doctor

  • Is my ulcer still open on a repeat scope?
  • Was the germ test done off the acid tablet, and is a repeat needed?
  • Do I need a fresh biopsy?
  • Is there anything in my tablets that could be injuring my stomach?
  • Do I need a gastrin test, and how do I stop the acid tablet for it?
  • How long should I stay on the acid tablet, and how will we follow up?

Frequently asked questions

Can an ulcer come back after the germ has been cleared?

Yes. The germ can return, and a pain tablet can start the ulcer again. Staying off pain tablets and testing after treatment lowers that chance.

Do I need a repeat scope if my burning has gone?

For a stomach ulcer, usually yes. Feeling better does not prove the ulcer has closed, and a repeat scope with biopsy rules out a growth.

Can I stop my acid tablet once the ulcer has healed?

Not always. Many people can stop. Some need to continue, such as those who need a pain tablet or aspirin, or who had a bleed. Your doctor decides.

Why was I asked to stop my acid tablet before a test?

An acid tablet gives a false result on the germ test and the gastrin test. Stop it only as your doctor directs, with cover for the gap.

Could a stomach ulcer that will not heal be a cancer?

Sometimes, which is why it is biopsied again and scoped until it heals. Most stubborn ulcers are benign, and the biopsy is how we know.

Will I need an operation for a stubborn ulcer?

Seldom. Almost all heal once the cause is found and fixed. Surgery is a last step after every cause has been checked.

Where Dr Harsh Shah sees patients and operates

Shah’s Gastro, Cancer & Robotic Surgery Centre, Gota, Ahmedabad

Consultation, review of endoscopy, biopsy and scan reports, second opinions and follow-up.

+91-63555-64601 · Directions to the Gota clinic

Apollo Hospital, Bhat, Gandhinagar

Apollo Hospital International Limited, GIDC Bhat Industrial Estate, Bhat, Gandhinagar. Endoscopy and biopsy, CT scans, surgery for stomach and duodenal disorders, and inpatient care.

WhatsApp +91-63555-64601 · Directions to Apollo, Bhat

An ulcer that does not heal, or returns after it healed, almost always has a reason that can be found. Have you taken acid tablets for months and still feel the burning? Send us your scope report and your tablet list. We look at both with you and plan the next step after examination. Call +91-63555-64601 Send your scope report before the visit

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Dr. Harsh J Shah
Dr Harsh Shah - Surgical Gastroenterologist and GI Robotic Surgeon, Ahmedabad
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